|
add_subanalysis_flags()
|
Flag patients for subanalysis |
|
calculate_comorbidity_scores()
|
Calculates Elixhauser comorbidity scores |
|
clean_process_clinical_data()
|
Clean and process EHR data |
|
ddi_ohdsi_rxnorm
|
ddi_ohdsi_rxnorm |
|
ddi_rxcui2in
|
ddi_rxcui2in |
|
ddi_rxcui_names
|
ddi_rxcui_names |
|
define_observation_periods()
|
Define baseline and treatment periods |
|
dr_ts_tutorial_data
|
dr_ts_tutorial_data |
|
drugsHyperlipidemia
|
drugsHyperlipidemia |
|
drugsHypertension
|
drugsHypertension |
|
extract_clinical_data()
|
Extract clinical data from All of Us dataset |
|
extract_icd_codes()
|
Function to get ICD data for calculating elixhauser scores |
|
map_drugs_to_ingredients()
|
For drug repurposing EHR validation studies, map patient drugs to ingredients |
|
observation_period_drug_exposures()
|
Get baseline and treatment period drug exposures |
|
ohdsi_icd_elix
|
ohdsi_icd_elix |
|
process_biomarker()
|
Process biomarkers data |
|
process_clinical_data_lmm()
|
Clean and process EHR data for linear mixed model analysis |
|
process_covariates()
|
Process covariates data |
|
vw_weights
|
vw_weights |